BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031H02SP1|AL429470
(795 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig337 1130 0.0
>3x_Contig337
Length = 965
Score = 1130 bits (566), Expect = 0.0
Identities = 596/610 (97%), Gaps = 1/610 (0%)
Strand = Plus / Plus
Query: 186 gtacaactgcttgtcgtcttcttcgccgccttggttcatcttgaacaaatcatcgttata 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 gtacaactgcttgtcgtcttcttcgccgccttggttcatcttgaacaaatcatcgttata 70
Query: 246 tgccaaagcatcgaaagtcggatctctaccgataccagcgttaggactcacgtcacgaga 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 tgccaaagcatcgaaagtcggatctctaccgataccagcgttaggactcacgtcacgaga 130
Query: 306 cactgttcctgcacgctgatgagacctagatctctctttcttctgctgttttctcttctg 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 cactgttcctgcacgctgatgagacctagatctctctttcttctgctgttttctcttctg 190
Query: 366 tcctttcccgttcgctgatgatgaagaggctggccgtttcctaccagaactggaacctga 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 tcctttcccgttcgctgatgatgaagaggctggccgtttcctaccagaactggaacctga 250
Query: 426 tccagccgttccgttaccaaggccagcgattccagctcctaaatcaacagatccagcctt 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 tccagccgttccgttaccaaggccagcgattccagctcctaaatcaacagatccagcctt 310
Query: 486 cttatccgaaagctcatcatccaagggtgcaagtaacccatcttcctcaagtgactcgat 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 cttatccgaaagctcatcatccaagggtgcaagtaacccatcttcctcaagtgactcgat 370
Query: 546 gttggccttgatcttgctcaaatgtttcgttactagatacaatgctgtattggctaatat 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 gttggccttgatcttgctcaaatgtttcgttactagatacaatgctgtattggctaatat 430
Query: 606 gcatttctgtagtagcaaatcgccgcatcgcttcatctctttttctaccgtctcaktaat 665
|||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 431 gcatttctgttgttgcaaatcgccgcatcgcttcatctctttttctaccgtctcagtaat 490
Query: 666 gkatcyctctttagkgtccttkgtcaacgaaccatgctktttcacaattttatgaagcac 725
| ||| |||||||| |||||| |||||||||||||||| |||||||| ||||||||||||
Sbjct: 491 ggatccctctttagggtccttggtcaacgaaccatgctgtttcacaagtttatgaagcac 550
Query: 726 ktaatcctcccgtatgtactgctctcttgakctcaccatgtgttttatctgctacctgca 785
||||||||||||| ||||||||||||||| ||||||| | |||||||||||||||||||
Sbjct: 551 gtaatcctcccgtaggtactgctctcttgagctcacca-gggttttatctgctacctgca 609
Query: 786 tttcatccat 795
||||||||||
Sbjct: 610 tttcatccat 619
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.32
Gapped
Lambda K H
1.38 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5283
Number of Sequences: 1807
Number of extensions: 5283
Number of successful extensions: 143
Number of sequences better than 1.0e-20: 1
length of query: 795
length of database: 10,358,551
effective HSP length: 16
effective length of query: 779
effective length of database: 10,329,639
effective search space: 8046788781
effective search space used: 8046788781
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)